Automatic Procedures for Compilation of Promoter sequences and their Evaluation based on Signal Content and Positional Distributions

نویسندگان

  • Christoph D. Schmid
  • Viviane Praz
  • Mauro Delorenzi
  • Rouaida Perier
  • Philipp Bucher
چکیده

Collections of precisely mapped eukaryotic transcription start sites (TSS) are important resources for studying gene control elements and for developing promoter prediction algorithms. The present study consists of two parts. First, we present a new clustering method to infer TSS positions from EST 5' ends. Second, we present a quality evaluation of the promoter sequences defined by TSS positions from the first part of the study.

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تاریخ انتشار 2003